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BIS180L Discussion of statistical distributions, RNAseq stats, genotype X treatment interactions.
BIS180L May 21 In Class
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BIS180L Lecture introducing correlation and mutual rank gene expression networks.
BIS180L Lecture14 Networks part2
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BIS180L Intro to K-means and Hierarchical Clustering
BIS180L Lecture14 Clustering
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BIS180L Lecture on GO terms and GO term enrichment.
BIS180L Lecture 12 GO enrichment
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quick demo of the Rstudio Regexplain add-in
BIS180L_RegExplain
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Intro to RNAseq analysis
BIS180L Lecture 11
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In class lecture on SAM/BAM files, IGV, and SNPs
BIS180L May 14 In Class
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BIS180L: Introduction to Shiny
BIS180L Lecture 9
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QQ plots and GWAS
BIS180L Apr 30 In Class
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Multiple testing
BIS180L Apr 28 in class
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BIS180L Lecture on PCA and MDS as applied to SNP data sets.
BIS180L Lecture 7b PCA
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BIS180L Intro to Rice data set.
BIS180L Lecture7a RiceSNPs
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In class lecture on interpreting phylogenetic trees
BIS180L Apr 21 In Class
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BIS180L Lecture 6. Quick demo of changing instance size and on how to include interactive tables in in knitted documents.
BIS180L Lecture 6: Instance size, interactive…
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In class demo of knitting Rmarkdown; Q&A
BIS180L in class Apr16
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