Search for tag: "cfde"

Intro to R Programming

This free two-hour workshop provides an overview of basics of R programming language along with RStudio which is a user-friendly environment for working with R. You will be introduced to the syntax,…

From  Jeremy Walter 0 likes 17 plays 0  

Tag_Download_App_Output

Tagging and download of DESeq2 app generated outputs

From  Saranya Canchi 0 likes 3 plays 0  

AppSetting_DESeq2_App

Selecting all the settings for the DESeq2 app

From  Saranya Canchi 0 likes 3 plays 0  

Input_setup_DESeq2_App

Setting up the input files for DESeq2 app

From  Saranya Canchi 0 likes 9 plays 0  

Copy_GTF_Reference

Copying reference annotation in GTF format to project directory.

From  Saranya Canchi 0 likes 3 plays 0  

RNA-Seq Concepts, Designs, & Workflows

This presentation was given on July 21, 2021, sponsored by the Common Fund Data Ecosystem. The presentation was made by Dr. Amanda Charbonneau. This two-hour workshop presents a coding-free overview…

From  Jeremy Walter 0 likes 21 plays 0  

Set up Rstudio panels

From  Marisa Lim 0 likes 108 plays 0  

GCP-upload-files

How to upload files to a Google Storage bucket and copy to VM

From  Marisa Lim 0 likes 3 plays 0  

GCP-download-files

How to download files from VM to Google Storage bucket

From  Marisa Lim 0 likes 3 plays 0  

GCP-create-VM

How to set up a Google Cloud Platform virtual machine

From  Marisa Lim 0 likes 11 plays 0  

terra-grist-review-outputs

Demo of reviewing outputs from analysis with genome-grist on Terra after job is completed.

From  Marisa Lim 0 likes 3 plays 0  

terra-grist-submit-job

Demo of submitting a job on Terra to run an analysis with genome-grist

From  Marisa Lim 0 likes 6 plays 0  

Data_Cruncher_pcaExplorer

Highlighting pcaExplorer pas in RStudio editor

From  Saranya Canchi 0 likes 9 plays 0  

Load_Script_Data_Cruncher

Loading analysis script to RStudio editor

From  Saranya Canchi 0 likes 10 plays 0  

Tag_Download_App_Output

Tagging and download of DESeq2 app generated outputs

From  Saranya Canchi 0 likes 6 plays 0  

AppSetting_DESeq2_App_OLD

Selecting all the settings for the DESeq2 app

From  Saranya Canchi 0 likes 8 plays 0