Search for tag: "proteomics"

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09:15 Viewing Scans Across the peaks in Skyline Viewing Scans Across the peaks in Skyline	Viewing Scans Across the peaks in Skyline Bini Ramachandran Hoped on Zoom to help me figure out scans across the peak in skyline! Thanks Bini!! proteomics peak lot skyline auto panorama integration column tailing tail peptides min files symmetry s. purposes temperature bug format rice samples From Brett Phinney 0 likes 3 plays 0
47:26 Importing DIA-NN data into Skyline for… Importing DIA-NN data into Skyline for visualization	Importing DIA-NN data into Skyline for visualization Importing DIA-NN data into Skyline for visualization proteomics peak boundaries peptide diane skyline peptides protein retention library proteins error files protium mobility output import directory times peaks spectra From Brett Phinney 0 likes 103 plays 0
24:19 Spectronaut 17 and picking out bad data Spectronaut 17 and picking out bad data	Spectronaut 17 and picking out bad data Looking at the boost in performance of Spectronaut 17 and helping to pick out some data data we generated... proteomics protein proteins peptides sample groups samples method spectrum window things overlay lot dot plot run slice identifications variation peak points From Brett Phinney 0 likes 41 plays 0
13:43 Spectronaut 17 and 300 samples per day methods Spectronaut 17 and 300 samples per day methods	Spectronaut 17 and 300 samples per day methods Looking at some 300 spd HeLa Data proteomics peptides protein groups proteins 1800s library min peak minute spectrum coefficient run scans mobility peaks method samples irt analysis import From Brett Phinney 0 likes 64 plays 0
13:27 Looking in your Spectronaut Export all Folder Looking in your Spectronaut Export all Folder	Looking in your Spectronaut Export all Folder What magical items await in your Spectronaut export all folder? Watch and see! Part of the 2022 Proteomics Quick"ish" Bites collection … proteomics spectronaut peptide run proteins experiment protein format spectrum condition things overview conditions error kind runs reports folder export quantities quantity pivot From Brett Phinney 1 likes 65 plays 0
27:08 Dr. Richard Michelmore - The UC Davis Genome… Dr. Richard Michelmore - The UC Davis Genome Center	Dr. Richard Michelmore - The UC Davis Genome Center genome dna campus sequencing lab biology sequence proteomics cell davis projects analysis level amounts technologies machines facility spec phenotype expression From Theresa Garcia 0 likes 12 plays 0
01:09:56 Proteomics Advisory committee meeting Feb 2 2022 Proteomics Advisory committee meeting Feb 2 2022	Proteomics Advisory committee meeting Feb 2 2022 Proteomics Advisory committee meeting Feb 2 2022 proteomics lot things samples lab core sample instruments thing campus money proteins instrumentation instrument protein question davis point mass stuff From Brett Phinney 0 likes 4 plays 0
21:03 Feb2022_LampProteinExample Feb2022_LampProteinExample	Feb2022_LampProteinExample Go through this real dataset with me and learn how to find your proteins and peptides of interest in Spectronaut! This one is a little longer sorry, but it's so worth it ! proteomics samples evidence peptide control signal protein spectrum proteins tv imputation scale log kind sequence result analysis spec mass videos suspicion From Brett Phinney 0 likes 74 plays 0
14:55 Qick_bite2_dia-nn Qick_bite2_dia-nn	Qick_bite2_dia-nn Learn how to download and run dia-nn ! It's free and super easy proteomics library minute proteins protein threads output gene files runs minutes groups run learning genes download precursors signal quantity hour proteome From Brett Phinney 1 likes 173 plays 1
10:06 Quickbite1 Finding peptides and proteins in your… Quickbite1 Finding peptides and proteins in your Spectronaut dataset	Quickbite1 Finding peptides and proteins in your Spectronaut dataset How to look for proteins and peptides in your dataset and look at the raw mass spec data to see how good the data is ! Let's look using a covid dataset we generated proteomics sample retention samples proteins peptide minutes peptides signal protein flag quality coverage spike swabs mobility times run quantity sequence person From Brett Phinney 0 likes 93 plays 0
08:58 Spectronaut Part 4 exporting reports Spectronaut Part 4 exporting reports	Spectronaut Part 4 exporting reports Spectronaut Part 4 exporting reports proteomics mass spectrometry protein peptide format things stuff phosphorylation pivot default reports simplify sorts ibec quantitation columns schema csv export stats ms ptm From Brett Phinney 0 likes 44 plays 0
39:28 Spectronaut Part 3 Post analysis Spectronaut Part 3 Post analysis	Spectronaut Part 3 Post analysis Spectronaut Part 3 Post analysis proteomics mass spectrometry minute run protein runs proteins signal lot peptides things sample peak samples log precursors peptide conditions change graph difference gradient From Brett Phinney 0 likes 63 plays 0
29:00 Part 2 DIA Spectronaut Part 2 DIA Spectronaut	Part 2 DIA Spectronaut Part 2: Using Spectronaut for with your DIA Data proteomics mass spectrometry protein proteins things analysis sample run experiments condition minutes peptide hit default imputation method runs viewer spectrum infection values label From Brett Phinney 0 likes 82 plays 0
51:22 Spectronaut Opening Data and Working with the… Spectronaut Opening Data and Working with the Tree View	Spectronaut Opening Data and Working with the Tree View Spectronaut Opening Data and Working with the Tree View proteomics data independant aquisition mass spectrometry peptides protein minutes runs retention run mobility peptide spectrum kind mass files minute gradient things analysis ms ion prediction windows From Brett Phinney 0 likes 262 plays 0
56:08 Intro to Proteomics Brett Phinney Intro to Proteomics Brett Phinney	Intro to Proteomics Brett Phinney Intro to Proteomics proteomics proteins peptides lot protein mass things peptide spectrometer kind level couple spectrometers times sample acquisition thousands class videos mixture From Brett Phinney 0 likes 3,307 plays 0
01:20:41 Storer Lecture Series - Larry Gold 5-28-2013 Storer Lecture Series - Larry Gold 5-28-2013	Storer Lecture Series - Larry Gold 5-28-2013 "Human Proteomics and Healthcare". May 28, 2013 storer cancer proteomics blood sampling (music) uc davis ucd biological sciences protein diseases research bio sci storer syndromes nutrition biology molecules measurement (mathematics) bio sci and disorders presentation applications effects larry gold life sciences tumor tracy and ruth storer lung cancer biomarkers From ATS Video 0 likes 47 plays 0